STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001088annotation not available (512 aa)    
Predicted Functional Partners:
CUL3
Cullin 3.
    
 0.945
PIK3R1
Phosphoinositide-3-kinase regulatory subunit 1.
    
 
 0.888
COPS3
COP9 signalosome subunit 3.
    
  0.881
ENSODEP00000011599
annotation not available
    
  0.834
ENSODEP00000026370
annotation not available
    
  0.834
CUL1
Cullin 1.
    
 0.808
COPS8
COP9 signalosome subunit 8.
    
  0.805
COPS6
COP9 signalosome subunit 6.
    
  0.800
ENSODEP00000000769
annotation not available
    
 0.779
ENSODEP00000011191
annotation not available
    
 0.779
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.