close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001089annotation not available (270 aa)    
Predicted Functional Partners:
TRIM28
Tripartite motif containing 28.
    
 0.958
TRAF6
TNF receptor associated factor 6.
   
  0.859
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.846
TRIM33
Tripartite motif containing 33.
    
 0.843
ENSODEP00000011400
annotation not available
    
   0.827
ZNF213
Zinc finger protein 213.
    
  
0.825
ENSODEP00000025351
annotation not available
    
 0.797
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.795
NYNRIN
NYN domain and retroviral integrase containing.
    
 0.773
MZF1
Myeloid zinc finger 1.
    
  
0.767
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.