STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAF13DDB1 and CUL4 associated factor 13. (445 aa)    
Predicted Functional Partners:
WDR3
WD repeat domain 3.
   
 0.999
NOL10
Nucleolar protein 10.
   
 0.999
UTP15
UTP15 small subunit processome component.
   
 0.999
NGDN
Neuroguidin.
   
 0.999
WDR36
WD repeat domain 36.
   
  0.999
IMP4
IMP U3 small nucleolar ribonucleoprotein 4.
   
  0.999
EMG1
EMG1 N1-specific pseudouridine methyltransferase.
   
  0.999
RCL1
RNA terminal phosphate cyclase like 1.
   
  0.999
BMS1
BMS1 ribosome biogenesis factor.
   
 0.999
WDR43
WD repeat domain 43.
   
 0.999
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.