STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IDI1Isopentenyl-diphosphate delta isomerase 1. (205 aa)    
Predicted Functional Partners:
MVD
Mevalonate diphosphate decarboxylase.
  
 
 0.998
FDPS
Farnesyl diphosphate synthase.
  
 
 0.994
HMGCS1
3-hydroxy-3-methylglutaryl-CoA synthase 1.
  
  
 0.971
SQLE
Squalene epoxidase.
  
  
 0.971
LSS
Lanosterol synthase.
  
 
 0.967
ENSODEP00000014618
annotation not available
  
 
 0.961
FDFT1
Farnesyl-diphosphate farnesyltransferase 1.
  
 
 0.959
CYP51A1
Cytochrome P450 family 51 subfamily A member 1.
  
  
 0.953
MSMO1
Methylsterol monooxygenase 1.
  
  
 0.953
ENSODEP00000009990
annotation not available
  
 
 0.948
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.