STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEPTIN11Septin 11. (432 aa)    
Predicted Functional Partners:
ENSODEP00000015224
annotation not available
   
 0.994
SEPTIN6
Septin 6.
   
 
 0.992
SEPTIN8
Septin 8.
   
   0.992
SEPTIN1
Septin 1.
   
 0.991
SEPTIN9
Septin 9.
   
 0.988
SEPTIN12
Septin 12.
   
 0.988
ENSODEP00000017855
annotation not available
   
 0.988
Septin3
Septin 3.
   
 0.987
ENSODEP00000022483
annotation not available
   
 0.985
ENSODEP00000001188
annotation not available
   
 0.979
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.