STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGF12Fibroblast growth factor 12. (241 aa)    
Predicted Functional Partners:
SCN5A
Sodium voltage-gated channel alpha subunit 5.
    
 
 0.922
FGF14
Fibroblast growth factor 14.
   
    0.852
SCN8A
Sodium voltage-gated channel alpha subunit 8.
   
 
 0.841
MAPK8IP2
Mitogen-activated protein kinase 8 interacting protein 2.
   
 
 0.821
NOLC1
Nucleolar and coiled-body phosphoprotein 1.
    
   0.790
FGFR1
Fibroblast growth factor receptor 1.
    
 0.768
FGFR2
Fibroblast growth factor receptor 2.
    
 0.766
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.755
ENSODEP00000024866
annotation not available
    
 0.755
FGFR4
Fibroblast growth factor receptor 4.
    
 0.745
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.