STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD50Ankyrin repeat domain 50. (990 aa)    
Predicted Functional Partners:
ENSODEP00000003204
annotation not available
   
 0.881
ENSODEP00000004977
annotation not available
   
 0.881
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.878
MYO3B
Myosin IIIB.
    
 0.836
ENSODEP00000015638
annotation not available
    
 0.829
PPP6R2
Protein phosphatase 6 regulatory subunit 2.
    
 0.829
PPP6R3
Protein phosphatase 6 regulatory subunit 3.
    
 0.829
MYO3A
Myosin IIIA.
    
 0.824
IFT22
Intraflagellar transport 22.
    
 0.813
IFT88
Intraflagellar transport 88.
   
 0.787
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.