STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYTL5Synaptotagmin like 5. (753 aa)    
Predicted Functional Partners:
RAB27A
RAB27A, member RAS oncogene family.
    
 0.989
RAB27B
RAB27B, member RAS oncogene family.
    
 0.988
ENSODEP00000021135
annotation not available
   
 0.864
RAB3A
RAB3A, member RAS oncogene family.
   
 0.842
RAB3B
RAB3B, member RAS oncogene family.
   
 0.830
RAB3C
RAB3C, member RAS oncogene family.
   
 0.830
STON2
Stonin 2.
    
 0.823
STXBP2
Syntaxin binding protein 2.
    
 0.810
STXBP1
Syntaxin binding protein 1.
    
 0.786
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.722
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.