STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFAP52Cilia and flagella associated protein 52. (621 aa)    
Predicted Functional Partners:
EFHC1
EF-hand domain containing 1.
  
 
 0.996
EFHC2
EF-hand domain containing 2.
   
 
 0.993
TEKT1
Tektin 1.
   
 
 0.990
RIBC1
RIB43A domain with coiled-coils 1.
   
 0.988
ENSODEP00000020168
annotation not available
   
 
 0.987
CFAP126
Cilia and flagella associated protein 126.
   
 
 0.984
CFAP161
Cilia and flagella associated protein 161.
   
 0.984
PACRG
Parkin coregulated.
   
 
 0.982
EFCAB6
EF-hand calcium binding domain 6.
   
 0.981
DNAI1
Dynein axonemal intermediate chain 1.
   
 0.981
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.