STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001147annotation not available (428 aa)    
Predicted Functional Partners:
MFAP1
Microfibril associated protein 1.
   
 0.986
ENSODEP00000004018
annotation not available
   
 0.971
ENSODEP00000005097
annotation not available
   
 0.971
ZMAT2
Zinc finger matrin-type 2.
    
 0.966
WBP4
WW domain binding protein 4.
    
 0.955
PRPF6
pre-mRNA processing factor 6.
   
 0.953
TXNL4A
Thioredoxin like 4A.
    
 0.942
UBL5
Ubiquitin like 5.
    
 0.935
CDC5L
Cell division cycle 5 like.
    
 0.934
CDC40
Cell division cycle 40.
   
  0.932
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.