Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HTATIP2HIV-1 Tat interactive protein 2. (268 aa)    
Predicted Functional Partners:
UQCRFS1
Ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1.
  
 0.969
CYC1
Cytochrome c1.
   
 0.968
NDUFS3
NADH:ubiquinone oxidoreductase core subunit S3.
  
 0.968
NDUFV1
NADH:ubiquinone oxidoreductase core subunit V1.
  
 0.966
NDUFS2
NADH:ubiquinone oxidoreductase core subunit S2.
  
 0.956
NDUFA8
NADH:ubiquinone oxidoreductase subunit A8.
   
 0.952
Ndufb8
annotation not available
   
 0.949
NDUFB9
NADH:ubiquinone oxidoreductase subunit B9.
   
 0.945
NDUFS4
NADH:ubiquinone oxidoreductase subunit S4.
   
 0.945
ENSODEP00000011517
annotation not available
  
 0.940
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.