STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001151annotation not available (302 aa)    
Predicted Functional Partners:
COQ6
Coenzyme Q6, monooxygenase.
 
  
 
 0.930
LCMT1
Leucine carboxyl methyltransferase 1.
    
   0.869
ENSODEP00000013220
annotation not available
    
   0.827
RSRC2
Arginine and serine rich coiled-coil 2.
    
   0.827
GLDC
Glycine decarboxylase.
      
 0.813
PUM1
Pumilio RNA binding family member 1.
    
   0.812
PUM2
Pumilio RNA binding family member 2.
    
   0.812
CCDC25
Coiled-coil domain containing 25.
    
   0.771
KMO
Kynurenine 3-monooxygenase.
    
 
 0.707
FLAD1
Flavin adenine dinucleotide synthetase 1.
    
 
 0.694
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.