STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001154annotation not available (490 aa)    
Predicted Functional Partners:
IFI30
IFI30 lysosomal thiol reductase.
    
  0.696
FAM166B
Family with sequence similarity 166 member B.
    
  0.696
Cgas
Cyclic GMP-AMP synthase.
     
 0.679
FAM222A
Family with sequence similarity 222 member A.
    
   0.602
MALSU1
Mitochondrial assembly of ribosomal large subunit 1.
     
  0.595
MRPL16
Mitochondrial ribosomal protein L16.
     
  0.578
MRPL20
Mitochondrial ribosomal protein L20.
     
  0.578
MRPL19
Mitochondrial ribosomal protein L19.
     
  0.578
MRPL46
Mitochondrial ribosomal protein L46.
     
  0.578
STING1
Stimulator of interferon response cGAMP interactor 1.
    
 0.574
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.