Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001157annotation not available (287 aa)    
Predicted Functional Partners:
ENSODEP00000002866
annotation not available
   
    0.703
SREBF1
Sterol regulatory element binding transcription factor 1.
    
   0.628
ENSODEP00000018331
annotation not available
    
 
 0.628
ENSODEP00000018418
annotation not available
    
 
 0.628
ATF6
Activating transcription factor 6.
    
   0.584
DNPEP
Aspartyl aminopeptidase.
  
  
 0.584
ATF6B
Activating transcription factor 6 beta.
    
   0.584
GSR
Glutathione-disulfide reductase.
  
   0.567
AWAT2
acyl-CoA wax alcohol acyltransferase 2.
   
  
 0.551
LOC101587234
annotation not available
      
 0.548
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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