NLRP14 protein (Octodon degus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

NLRP14

NLR family pyrin domain containing 14. (968 aa)

Predicted Functional Partners:

NLRC4

0.934

NLRP6

0.912

GSDMD

0.901

ENSODEP00000009949

0.896

NEK6

0.890

NEK7

0.890

IL1B

0.887

ENSODEP00000015765

0.883

ENSODEP00000016363

0.883

ENSODEP00000017959

0.883

Your Current Organism:

Octodon degus

NCBI taxonomy Id: 10160
Other names: O. degus, degu

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSODEP00000009949	NLRP14	ENSODEP00000009949	ENSODEP00000001162	annotation not available	NLR family pyrin domain containing 14.	0.896
ENSODEP00000009949	NLRP6	ENSODEP00000009949	ENSODEP00000019883	annotation not available	NLR family pyrin domain containing 6.	0.870
ENSODEP00000015765	ENSODEP00000016363	ENSODEP00000015765	ENSODEP00000016363	annotation not available	annotation not available	0.933
ENSODEP00000015765	ENSODEP00000017959	ENSODEP00000015765	ENSODEP00000017959	annotation not available	annotation not available	0.933
ENSODEP00000015765	GSDMD	ENSODEP00000015765	ENSODEP00000020153	annotation not available	Gasdermin D.	0.997
ENSODEP00000015765	IL1B	ENSODEP00000015765	ENSODEP00000008953	annotation not available	Interleukin 1 beta.	0.960
ENSODEP00000015765	NLRC4	ENSODEP00000015765	ENSODEP00000014452	annotation not available	NLR family CARD domain containing 4.	0.979
ENSODEP00000015765	NLRP14	ENSODEP00000015765	ENSODEP00000001162	annotation not available	NLR family pyrin domain containing 14.	0.883
ENSODEP00000015765	NLRP6	ENSODEP00000015765	ENSODEP00000019883	annotation not available	NLR family pyrin domain containing 6.	0.955
ENSODEP00000016363	ENSODEP00000015765	ENSODEP00000016363	ENSODEP00000015765	annotation not available	annotation not available	0.933
ENSODEP00000016363	ENSODEP00000017959	ENSODEP00000016363	ENSODEP00000017959	annotation not available	annotation not available	0.903
ENSODEP00000016363	GSDMD	ENSODEP00000016363	ENSODEP00000020153	annotation not available	Gasdermin D.	0.993
ENSODEP00000016363	IL1B	ENSODEP00000016363	ENSODEP00000008953	annotation not available	Interleukin 1 beta.	0.978
ENSODEP00000016363	NLRC4	ENSODEP00000016363	ENSODEP00000014452	annotation not available	NLR family CARD domain containing 4.	0.982
ENSODEP00000016363	NLRP14	ENSODEP00000016363	ENSODEP00000001162	annotation not available	NLR family pyrin domain containing 14.	0.883
ENSODEP00000016363	NLRP6	ENSODEP00000016363	ENSODEP00000019883	annotation not available	NLR family pyrin domain containing 6.	0.933
ENSODEP00000017959	ENSODEP00000015765	ENSODEP00000017959	ENSODEP00000015765	annotation not available	annotation not available	0.933
ENSODEP00000017959	ENSODEP00000016363	ENSODEP00000017959	ENSODEP00000016363	annotation not available	annotation not available	0.903
ENSODEP00000017959	GSDMD	ENSODEP00000017959	ENSODEP00000020153	annotation not available	Gasdermin D.	0.993
ENSODEP00000017959	IL1B	ENSODEP00000017959	ENSODEP00000008953	annotation not available	Interleukin 1 beta.	0.989