STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001169annotation not available (333 aa)    
Predicted Functional Partners:
PSMD6
Proteasome 26S subunit, non-ATPase 6.
   
 0.996
PSMD13
Proteasome 26S subunit, non-ATPase 13.
   
 0.996
PSMD8
Proteasome 26S subunit, non-ATPase 8.
   
 0.996
PSMC4
Proteasome 26S subunit, ATPase 4.
   
 0.995
PSMD14
Proteasome 26S subunit, non-ATPase 14.
  
 0.995
PSMB1
Proteasome 20S subunit beta 1.
  
 0.993
ENSODEP00000007302
annotation not available
  
 0.992
Psmc5
Proteasome 26S subunit, ATPase 5.
  
 0.992
PSMD2
Proteasome 26S subunit, non-ATPase 2.
   
 0.991
PSMB2
Proteasome 20S subunit beta 2.
  
 0.988
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.