STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PLAAT1Phospholipase A and acyltransferase 1. (168 aa)    
Predicted Functional Partners:
ENSODEP00000002162
annotation not available
  
 0.995
DNAJC5
DnaJ heat shock protein family (Hsp40) member C5.
  
 0.921
ENSODEP00000016752
annotation not available
   
 0.919
PLB1
Phospholipase B1.
     
 0.909
DNAJC10
DnaJ heat shock protein family (Hsp40) member C10.
  
 0.897
PLA2G4A
Phospholipase A2 group IVA.
     
 0.891
BAG3
BCL2 associated athanogene 3.
   
 0.887
ALKBH7
alkB homolog 7.
   
   0.881
PLD2
Phospholipase D2.
   
 0.880
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
  
 
 0.879
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.