MYO10 protein (Octodon degus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MYO10

Myosin X. (1994 aa)

Predicted Functional Partners:

DCC

0.984

NEO1

0.974

USH1C

0.944

USH1G

0.931

ANKS4B

0.931

ARID4B

0.927

Arid4a

0.927

ENSODEP00000020185

0.927

ENSODEP00000024513

0.914

ENSODEP00000024569

0.914

Your Current Organism:

Octodon degus

NCBI taxonomy Id: 10160
Other names: O. degus, degu

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANKS4B	ENSODEP00000024513	ENSODEP00000014976	ENSODEP00000024513	Ankyrin repeat and sterile alpha motif domain containing 4B.	annotation not available	0.610
ANKS4B	ENSODEP00000024569	ENSODEP00000014976	ENSODEP00000024569	Ankyrin repeat and sterile alpha motif domain containing 4B.	annotation not available	0.610
ANKS4B	MYO10	ENSODEP00000014976	ENSODEP00000001183	Ankyrin repeat and sterile alpha motif domain containing 4B.	Myosin X.	0.931
ANKS4B	USH1C	ENSODEP00000014976	ENSODEP00000012362	Ankyrin repeat and sterile alpha motif domain containing 4B.	USH1 protein network component harmonin.	0.991
ARID4B	Arid4a	ENSODEP00000007199	ENSODEP00000019395	AT-rich interaction domain 4B.	AT-rich interaction domain 4A.	0.765
ARID4B	ENSODEP00000020185	ENSODEP00000007199	ENSODEP00000020185	AT-rich interaction domain 4B.	annotation not available	0.765
ARID4B	MYO10	ENSODEP00000007199	ENSODEP00000001183	AT-rich interaction domain 4B.	Myosin X.	0.927
ARID4B	USH1C	ENSODEP00000007199	ENSODEP00000012362	AT-rich interaction domain 4B.	USH1 protein network component harmonin.	0.583
Arid4a	ARID4B	ENSODEP00000019395	ENSODEP00000007199	AT-rich interaction domain 4A.	AT-rich interaction domain 4B.	0.765
Arid4a	ENSODEP00000020185	ENSODEP00000019395	ENSODEP00000020185	AT-rich interaction domain 4A.	annotation not available	0.975
Arid4a	MYO10	ENSODEP00000019395	ENSODEP00000001183	AT-rich interaction domain 4A.	Myosin X.	0.927
DCC	MYO10	ENSODEP00000025264	ENSODEP00000001183	DCC netrin 1 receptor.	Myosin X.	0.984
ENSODEP00000020185	ARID4B	ENSODEP00000020185	ENSODEP00000007199	annotation not available	AT-rich interaction domain 4B.	0.765
ENSODEP00000020185	Arid4a	ENSODEP00000020185	ENSODEP00000019395	annotation not available	AT-rich interaction domain 4A.	0.975
ENSODEP00000020185	MYO10	ENSODEP00000020185	ENSODEP00000001183	annotation not available	Myosin X.	0.927
ENSODEP00000024513	ANKS4B	ENSODEP00000024513	ENSODEP00000014976	annotation not available	Ankyrin repeat and sterile alpha motif domain containing 4B.	0.610
ENSODEP00000024513	ENSODEP00000024569	ENSODEP00000024513	ENSODEP00000024569	annotation not available	annotation not available	0.900
ENSODEP00000024513	MYO10	ENSODEP00000024513	ENSODEP00000001183	annotation not available	Myosin X.	0.914
ENSODEP00000024513	USH1C	ENSODEP00000024513	ENSODEP00000012362	annotation not available	USH1 protein network component harmonin.	0.931
ENSODEP00000024513	USH1G	ENSODEP00000024513	ENSODEP00000012756	annotation not available	USH1 protein network component sans.	0.703