STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEX11BPeroxisomal biogenesis factor 11 beta. (259 aa)    
Predicted Functional Partners:
ENSODEP00000010901
annotation not available
   
 0.990
ENSODEP00000018369
annotation not available
   
 0.990
PEX14
Peroxisomal biogenesis factor 14.
    
 0.988
PEX10
Peroxisomal biogenesis factor 10.
    
 0.984
ENSODEP00000017978
annotation not available
   
 0.982
FAM185A
Family with sequence similarity 185 member A.
    
 0.967
PEX11G
Peroxisomal biogenesis factor 11 gamma.
    
 0.965
PEX2
Peroxisomal biogenesis factor 2.
   
 0.941
PEX5
Peroxisomal biogenesis factor 5.
   
 0.923
PEX3
Peroxisomal biogenesis factor 3.
   
 0.916
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.