Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PEX11BPeroxisomal biogenesis factor 11 beta. (259 aa)    
Predicted Functional Partners:
PEX11G
Peroxisomal biogenesis factor 11 gamma.
    
 0.994
ENSODEP00000010901
annotation not available
   
 0.986
ENSODEP00000018369
annotation not available
   
 0.986
ENSODEP00000017978
annotation not available
   
 0.970
PEX14
Peroxisomal biogenesis factor 14.
    
 0.965
PEX3
Peroxisomal biogenesis factor 3.
   
 0.964
PEX11A
Peroxisomal biogenesis factor 11 alpha.
     
  0.960
FAM185A
Family with sequence similarity 185 member A.
    
 0.934
PEX10
Peroxisomal biogenesis factor 10.
    
 
 0.914
PEX2
Peroxisomal biogenesis factor 2.
    
 0.866
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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