STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001200annotation not available (242 aa)    
Predicted Functional Partners:
PPP3R1
Protein phosphatase 3 regulatory subunit B, alpha.
 
 
 0.980
PPP3R2
Protein phosphatase 3 regulatory subunit B, beta.
 
 
 0.975
RPAP3
RNA polymerase II associated protein 3.
   
 0.974
UXT
Ubiquitously expressed prefoldin like chaperone.
    
 
 0.964
PIH1D1
PIH1 domain containing 1.
    
 
 0.963
PFDN2
Prefoldin subunit 2.
    
 
 0.960
URI1
URI1 prefoldin like chaperone.
    
 
 0.959
PPP3CA
Protein phosphatase 3 catalytic subunit alpha.
    
 0.928
PPP3CC
Protein phosphatase 3 catalytic subunit gamma.
    
 0.928
ENSODEP00000019565
annotation not available
    
 0.928
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.