STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC27A5Solute carrier family 27 member 5. (689 aa)    
Predicted Functional Partners:
ENSODEP00000024107
annotation not available
   
 0.984
BBS7
Bardet-Biedl syndrome 7.
    
 0.983
ENSODEP00000010439
annotation not available
   
 0.983
TTC8
Tetratricopeptide repeat domain 8.
    
 0.980
ENSODEP00000013164
annotation not available
    
 0.967
ENSODEP00000020315
annotation not available
    
 0.964
ENSODEP00000025060
annotation not available
    
 0.964
BAAT
Bile acid-CoA:amino acid N-acyltransferase.
   
 
 0.951
KIFC2
Kinesin family member C2.
    
 0.950
KIFC3
Kinesin family member C3.
    
 0.950
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.