STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001205annotation not available (79 aa)    
Predicted Functional Partners:
CBX8
Chromobox 8.
    
 0.991
CBX7
Chromobox 7.
    
 0.990
CBX2
Chromobox 2.
    
 0.989
CBX4
Chromobox 4.
    
 0.987
ENSODEP00000016790
annotation not available
    
 0.986
RNF2
Ring finger protein 2.
    
 0.983
RING1
Ring finger protein 1.
    
 0.983
ENSODEP00000005907
annotation not available
 
  
 0.982
SCMH1
Scm polycomb group protein homolog 1.
    
 0.980
ENSODEP00000004585
annotation not available
    
 0.980
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.