STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arf1ADP ribosylation factor 1. (181 aa)    
Predicted Functional Partners:
CYTH2
Cytohesin 2.
    
 0.978
ENSODEP00000010090
annotation not available
    
 0.966
ENSODEP00000010785
annotation not available
    
 0.966
AP1B1
Adaptor related protein complex 1 subunit beta 1.
   
 0.956
ITSN1
Intersectin 1.
    
 0.953
GBF1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
    
 0.946
ENSODEP00000025351
annotation not available
   
 0.940
ARFGAP1
ADP ribosylation factor GTPase activating protein 1.
   
 0.936
AP1G1
Adaptor related protein complex 1 subunit gamma 1.
    
 0.936
COPB1
Coatomer protein complex subunit beta 1.
   
 0.929
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.