Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C1orf35Chromosome 1 open reading frame 35. (260 aa)    
Predicted Functional Partners:
BUD31
BUD31 homolog.
    
   0.819
TARBP2
TARBP2 subunit of RISC loading complex.
    
   0.795
ENSODEP00000010632
annotation not available
    
   0.742
Prkra
annotation not available
    
   0.742
RBMX2
RNA binding motif protein X-linked 2.
   
   0.725
MECP2
methyl-CpG binding protein 2.
    
   0.704
SNIP1
Smad nuclear interacting protein 1.
    
   0.704
ENSODEP00000001942
annotation not available
    
   0.701
ENSODEP00000002585
annotation not available
    
   0.701
ENSODEP00000002705
annotation not available
    
   0.701
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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