Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FGFR1OPFGFR1 oncogene partner. (398 aa)    
Predicted Functional Partners:
CEP350
Centrosomal protein 350.
    
 
 0.975
CEP19
Centrosomal protein 19.
    
 
 0.969
PPP2R3C
Protein phosphatase 2 regulatory subunit B''gamma.
    
 
 0.954
PACS1
Phosphofurin acidic cluster sorting protein 1.
    
   0.950
CEP78
Centrosomal protein 78.
    
 
 0.948
ENSODEP00000021258
annotation not available
   
 0.925
ENSODEP00000017775
annotation not available
    
 0.871
VASP
Vasodilator stimulated phosphoprotein.
    
   0.830
ACP5
Acid phosphatase 5, tartrate resistant.
     
 0.817
CCDC14
Coiled-coil domain containing 14.
    
   0.814
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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