STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001235annotation not available (27 aa)    
Predicted Functional Partners:
ENSODEP00000025351
annotation not available
    
 0.783
NME8
NME/NM23 family member 8.
    
 0.692
GART
annotation not available
     
  0.675
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.671
ENSODEP00000011039
annotation not available
    
 0.574
ENSODEP00000000138
annotation not available
    
  0.573
Tonsl
Tonsoku like, DNA repair protein.
    
  0.510
CD74
CD74 molecule.
  
 
  0.509
CYB5R4
Cytochrome b5 reductase 4.
    
 0.506
MRPS11
Mitochondrial ribosomal protein S11.
    
  0.479
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.