Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001237annotation not available (425 aa)    
Predicted Functional Partners:
PLK4
Polo like kinase 4.
   
 0.996
ENSODEP00000017775
annotation not available
    
 0.984
ENSODEP00000008831
annotation not available
   
 0.976
ENSODEP00000010129
annotation not available
   
 0.976
CEP85
Centrosomal protein 85.
    
 
 0.951
NEDD1
NEDD1 gamma-tubulin ring complex targeting factor.
   
 0.951
CCDC14
Coiled-coil domain containing 14.
   
 
 0.948
AKAP9
A-kinase anchoring protein 9.
   
 0.937
CEP63
Centrosomal protein 63.
   
 
 0.920
AURKC
Aurora kinase C.
   
 0.916
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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