ENSODEP00000001244 protein (Octodon degus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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Gene Fusion

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[Homology]

Score

ENSODEP00000001244

annotation not available (128 aa)

Predicted Functional Partners:

GNRH1

0.984

GNB3

0.969

GNB5

0.969

GNB2

0.969

GNA15

0.967

GNG11

0.966

GNGT1

0.966

GNG3

0.966

GNG12

0.966

GNG4

0.966

Your Current Organism:

Octodon degus

NCBI taxonomy Id: 10160
Other names: O. degus, degu

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSODEP00000001244	GNA15	ENSODEP00000001244	ENSODEP00000019093	annotation not available	G protein subunit alpha 15.	0.967
ENSODEP00000001244	GNB2	ENSODEP00000001244	ENSODEP00000022321	annotation not available	G protein subunit beta 2.	0.969
ENSODEP00000001244	GNB3	ENSODEP00000001244	ENSODEP00000004492	annotation not available	G protein subunit beta 3.	0.969
ENSODEP00000001244	GNB5	ENSODEP00000001244	ENSODEP00000008120	annotation not available	G protein subunit beta 5.	0.969
ENSODEP00000001244	GNG11	ENSODEP00000001244	ENSODEP00000001207	annotation not available	G protein subunit gamma 11.	0.966
ENSODEP00000001244	GNG12	ENSODEP00000001244	ENSODEP00000007398	annotation not available	G protein subunit gamma 12.	0.966
ENSODEP00000001244	GNG3	ENSODEP00000001244	ENSODEP00000003017	annotation not available	G protein subunit gamma 3.	0.966
ENSODEP00000001244	GNG4	ENSODEP00000001244	ENSODEP00000007763	annotation not available	G protein subunit gamma 4.	0.966
ENSODEP00000001244	GNGT1	ENSODEP00000001244	ENSODEP00000001227	annotation not available	G protein subunit gamma transducin 1.	0.966
ENSODEP00000001244	GNRH1	ENSODEP00000001244	ENSODEP00000010496	annotation not available	Gonadotropin releasing hormone 1.	0.984
GNA15	ENSODEP00000001244	ENSODEP00000019093	ENSODEP00000001244	G protein subunit alpha 15.	annotation not available	0.967
GNA15	GNB2	ENSODEP00000019093	ENSODEP00000022321	G protein subunit alpha 15.	G protein subunit beta 2.	0.923
GNA15	GNB3	ENSODEP00000019093	ENSODEP00000004492	G protein subunit alpha 15.	G protein subunit beta 3.	0.925
GNA15	GNB5	ENSODEP00000019093	ENSODEP00000008120	G protein subunit alpha 15.	G protein subunit beta 5.	0.893
GNA15	GNG11	ENSODEP00000019093	ENSODEP00000001207	G protein subunit alpha 15.	G protein subunit gamma 11.	0.821
GNA15	GNG12	ENSODEP00000019093	ENSODEP00000007398	G protein subunit alpha 15.	G protein subunit gamma 12.	0.947
GNA15	GNG3	ENSODEP00000019093	ENSODEP00000003017	G protein subunit alpha 15.	G protein subunit gamma 3.	0.946
GNA15	GNG4	ENSODEP00000019093	ENSODEP00000007763	G protein subunit alpha 15.	G protein subunit gamma 4.	0.839
GNA15	GNGT1	ENSODEP00000019093	ENSODEP00000001227	G protein subunit alpha 15.	G protein subunit gamma transducin 1.	0.821
GNA15	GNRH1	ENSODEP00000019093	ENSODEP00000010496	G protein subunit alpha 15.	Gonadotropin releasing hormone 1.	0.524