STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001245annotation not available (104 aa)    
Predicted Functional Partners:
NOL10
Nucleolar protein 10.
      
 0.753
ENSODEP00000001343
annotation not available
      
 0.653
ATP6V1C2
ATPase H+ transporting V1 subunit C2.
      
 0.619
OXA1L
OXA1L mitochondrial inner membrane protein.
      
 0.606
OSBPL3
Oxysterol binding protein like 3.
      
 0.600
ARHGEF3
Rho guanine nucleotide exchange factor 3.
      
 0.598
YIPF4
Yip1 domain family member 4.
      
 0.594
GPR37
G protein-coupled receptor 37.
      
 0.588
ENSODEP00000009004
annotation not available
   
  
 0.583
ENSODEP00000023205
annotation not available
   
  
 0.583
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.