ENSODEP00000001248 protein (Octodon degus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

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co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSODEP00000001248

annotation not available (316 aa)

Predicted Functional Partners:

Pgk1

0.968

ENSODEP00000006687

0.968

ENSODEP00000006770

0.968

ENSODEP00000003716

0.963

ENSODEP00000011114

0.963

ENSODEP00000013740

0.963

ENSODEP00000013868

0.963

GPI

0.962

H6PD

0.949

ALDOB

0.939

Your Current Organism:

Octodon degus

NCBI taxonomy Id: 10160
Other names: O. degus, degu

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALDOB	ENSODEP00000001248	ENSODEP00000005360	ENSODEP00000001248	Aldolase, fructose-bisphosphate B.	annotation not available	0.939
ALDOB	ENSODEP00000003716	ENSODEP00000005360	ENSODEP00000003716	Aldolase, fructose-bisphosphate B.	annotation not available	0.947
ALDOB	ENSODEP00000006687	ENSODEP00000005360	ENSODEP00000006687	Aldolase, fructose-bisphosphate B.	annotation not available	0.819
ALDOB	ENSODEP00000006770	ENSODEP00000005360	ENSODEP00000006770	Aldolase, fructose-bisphosphate B.	annotation not available	0.819
ALDOB	ENSODEP00000011114	ENSODEP00000005360	ENSODEP00000011114	Aldolase, fructose-bisphosphate B.	annotation not available	0.947
ALDOB	ENSODEP00000013740	ENSODEP00000005360	ENSODEP00000013740	Aldolase, fructose-bisphosphate B.	annotation not available	0.947
ALDOB	ENSODEP00000013868	ENSODEP00000005360	ENSODEP00000013868	Aldolase, fructose-bisphosphate B.	annotation not available	0.947
ALDOB	GPI	ENSODEP00000005360	ENSODEP00000020025	Aldolase, fructose-bisphosphate B.	Glucose-6-phosphate isomerase.	0.991
ALDOB	H6PD	ENSODEP00000005360	ENSODEP00000016442	Aldolase, fructose-bisphosphate B.	Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.	0.976
ALDOB	Pgk1	ENSODEP00000005360	ENSODEP00000000665	Aldolase, fructose-bisphosphate B.	annotation not available	0.819
ENSODEP00000001248	ALDOB	ENSODEP00000001248	ENSODEP00000005360	annotation not available	Aldolase, fructose-bisphosphate B.	0.939
ENSODEP00000001248	ENSODEP00000003716	ENSODEP00000001248	ENSODEP00000003716	annotation not available	annotation not available	0.963
ENSODEP00000001248	ENSODEP00000006687	ENSODEP00000001248	ENSODEP00000006687	annotation not available	annotation not available	0.968
ENSODEP00000001248	ENSODEP00000006770	ENSODEP00000001248	ENSODEP00000006770	annotation not available	annotation not available	0.968
ENSODEP00000001248	ENSODEP00000011114	ENSODEP00000001248	ENSODEP00000011114	annotation not available	annotation not available	0.963
ENSODEP00000001248	ENSODEP00000013740	ENSODEP00000001248	ENSODEP00000013740	annotation not available	annotation not available	0.963
ENSODEP00000001248	ENSODEP00000013868	ENSODEP00000001248	ENSODEP00000013868	annotation not available	annotation not available	0.963
ENSODEP00000001248	GPI	ENSODEP00000001248	ENSODEP00000020025	annotation not available	Glucose-6-phosphate isomerase.	0.962
ENSODEP00000001248	H6PD	ENSODEP00000001248	ENSODEP00000016442	annotation not available	Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.	0.949
ENSODEP00000001248	Pgk1	ENSODEP00000001248	ENSODEP00000000665	annotation not available	annotation not available	0.968