STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001249annotation not available (131 aa)    
Predicted Functional Partners:
CLPP
Caseinolytic mitochondrial matrix peptidase proteolytic subunit.
  
 
 0.696
GPHN
Gephyrin.
  
 
 0.683
SAMM50
SAMM50 sorting and assembly machinery component.
  
 
 0.678
TP63
Tumor protein p63.
    
 0.673
TP73
Tumor protein p73.
    
 0.673
TP53
Tumor protein p53.
    
 0.673
ENSODEP00000001096
annotation not available
  
 
 0.648
ENSODEP00000011852
annotation not available
  
 
 0.648
ENSODEP00000016785
annotation not available
  
 
 0.648
ENSODEP00000018127
annotation not available
  
 
 0.648
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.