STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRPXSushi repeat containing protein X-linked. (464 aa)    
Predicted Functional Partners:
ZCCHC24
Zinc finger CCHC-type containing 24.
      
 0.543
ARRDC2
Arrestin domain containing 2.
      
 0.536
FSTL1
Follistatin like 1.
   
  
 0.461
POFUT2
Protein O-fucosyltransferase 2.
      
 0.454
TP53I13
Tumor protein p53 inducible protein 13.
      
 0.432
PDK1
Pyruvate dehydrogenase kinase 1.
      
 0.431
ENSODEP00000025512
annotation not available
      
 0.431
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.