Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM220Transmembrane protein 220. (181 aa)    
Predicted Functional Partners:
ENSODEP00000002493
annotation not available
    
   0.716
COX6B2
Cytochrome c oxidase subunit 6B2.
    
   0.716
ENSODEP00000020074
annotation not available
    
   0.716
LOC101567514
Cytochrome c oxidase subunit 6B1.
    
   0.716
TRIR
Telomerase RNA component interacting RNase.
    
   0.632
ENSODEP00000000849
annotation not available
      
 0.582
ENSODEP00000008650
annotation not available
      
 0.582
PIRT
Phosphoinositide interacting regulator of transient receptor potential channels.
      
 0.582
ANKMY1
Ankyrin repeat and MYND domain containing 1.
      
 0.578
ENSODEP00000006697
annotation not available
    
   0.576
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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