STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLP2Proteolipid protein 2. (152 aa)    
Predicted Functional Partners:
PLP1
Proteolipid protein 1.
   
  
 0.856
TMPRSS2
Transmembrane serine protease 2.
    
 
 0.802
PCBP1
poly(rC) binding protein 1.
      
 0.737
PDCL2
Phosducin like 2.
      
 0.702
PDC
Phosducin.
      
 0.675
PATZ1
POZ/BTB and AT hook containing zinc finger 1.
      
 0.621
CMTM7
CKLF like MARVEL transmembrane domain containing 7.
      
 0.605
ENSODEP00000001460
annotation not available
   
  
 0.583
LOC101579326
Annexin A1.
   
  
 0.583
ENSODEP00000011346
annotation not available
   
  
 0.583
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.