STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLF10Kruppel like factor 10. (481 aa)    
Predicted Functional Partners:
FOXP3
Forkhead box P3.
    
 
 0.949
SIN3A
SIN3 transcription regulator family member A.
    
 0.891
SP1
Sp1 transcription factor.
    
  0.866
SIN3B
SIN3 transcription regulator family member B.
    
 0.818
SIAH1
Siah E3 ubiquitin protein ligase 1.
    
 
 0.806
NAB2
NGFI-A binding protein 2.
    
 0.800
ENSODEP00000025351
annotation not available
    
 0.783
NME8
NME/NM23 family member 8.
    
 0.692
SIAH2
Siah E3 ubiquitin protein ligase 2.
    
 
 0.687
RELB
RELB proto-oncogene, NF-kB subunit.
    
 0.685
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.