STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001281annotation not available (142 aa)    
Predicted Functional Partners:
ROCK1
Rho associated coiled-coil containing protein kinase 1.
   
 0.974
ARHGEF12
Rho guanine nucleotide exchange factor 12.
   
 0.970
SMURF1
SMAD specific E3 ubiquitin protein ligase 1.
    
 0.970
ARHGEF2
Rho/Rac guanine nucleotide exchange factor 2.
   
 0.969
ARHGEF11
Rho guanine nucleotide exchange factor 11.
   
 0.969
ARHGAP35
Rho GTPase activating protein 35.
    
 0.967
ARHGEF1
Rho guanine nucleotide exchange factor 1.
   
 0.967
PKN1
Protein kinase N1.
    
 0.965
ENSODEP00000020079
annotation not available
   
 0.963
DAAM1
Dishevelled associated activator of morphogenesis 1.
    
 0.962
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.