STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001281annotation not available (142 aa)    
Predicted Functional Partners:
ENSODEP00000010090
annotation not available
    
 0.999
ENSODEP00000010785
annotation not available
    
 0.999
ARHGAP35
Rho GTPase activating protein 35.
    
 0.979
ITSN1
Intersectin 1.
    
 0.978
ROCK1
Rho associated coiled-coil containing protein kinase 1.
  
 0.978
ARHGEF11
Rho guanine nucleotide exchange factor 11.
   
 0.978
ARHGEF28
Rho guanine nucleotide exchange factor 28.
   
 0.977
PKN1
Protein kinase N1.
    
 0.977
ARHGEF2
Rho/Rac guanine nucleotide exchange factor 2.
   
 0.977
ENSODEP00000020079
annotation not available
   
 0.977
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.