STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PITRM1Pitrilysin metallopeptidase 1. (1027 aa)    
Predicted Functional Partners:
APP
Amyloid beta precursor protein.
    
 
 0.955
GRPEL1
GrpE like 1, mitochondrial.
  
 
 0.902
PDHB
Pyruvate dehydrogenase E1 beta subunit.
   
   0.891
DLD
Dihydrolipoamide dehydrogenase.
   
 
 0.889
XPNPEP1
X-prolyl aminopeptidase 1.
   
 
 0.872
XPNPEP2
X-prolyl aminopeptidase 2.
   
 
 0.872
ENSODEP00000009010
annotation not available
   
 
 0.854
GRPEL2
GrpE like 2, mitochondrial.
  
 
 0.849
COQ2
Coenzyme Q2, polyprenyltransferase.
     
 0.839
ENSODEP00000001882
annotation not available
   
 
 0.834
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.