Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Emc2annotation not available (297 aa)    
Predicted Functional Partners:
EMC3
ER membrane protein complex subunit 3.
   
 0.956
EMC9
ER membrane protein complex subunit 9.
   
 0.947
EMC8
ER membrane protein complex subunit 8.
   
 0.947
EMC6
ER membrane protein complex subunit 6.
   
 0.947
EMC1
ER membrane protein complex subunit 1.
   
 0.945
EMC4
ER membrane protein complex subunit 4.
   
 0.943
EMC7
ER membrane protein complex subunit 7.
   
 0.937
EMC10
ER membrane protein complex subunit 10.
    
 0.935
ENSODEP00000002946
annotation not available
    
 0.882
SEC63
SEC63 homolog, protein translocation regulator.
    
 
 0.866
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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