STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APCDD1APC down-regulated 1. (508 aa)    
Predicted Functional Partners:
LRP5
LDL receptor related protein 5.
    
 0.982
WNT2
Wnt family member 2.
    
 0.978
WNT2B
Wnt family member 2B.
    
 0.978
LRP6
LDL receptor related protein 6.
    
 0.975
WNT16
Wnt family member 16.
    
 0.975
WNT10A
Wnt family member 10A.
    
 0.974
WNT9B
Wnt family member 9B.
    
 0.972
WNT10B
Wnt family member 10B.
    
 0.967
WNT9A
Wnt family member 9A.
    
 0.966
WNT5A
Wnt family member 5A.
    
 0.966
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.