STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDAP2Ganglioside induced differentiation associated protein 2. (497 aa)    
Predicted Functional Partners:
ENSODEP00000022699
annotation not available
   
  
 0.805
Aifm1
annotation not available
  
 0.720
PYROXD1
Pyridine nucleotide-disulphide oxidoreductase domain 1.
  
 0.639
MACROH2A2
macroH2A.2 histone.
  
 
 
 0.632
AIFM3
Apoptosis inducing factor mitochondria associated 3.
  
 0.611
AIFM2
Apoptosis inducing factor mitochondria associated 2.
  
 0.595
ENSODEP00000011371
annotation not available
  
 0.592
HDAC11
Histone deacetylase 11.
  
 0.590
ENSODEP00000000262
annotation not available
  
 0.590
IGSF3
Immunoglobulin superfamily member 3.
    
 
 0.557
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.