STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDAP2Ganglioside induced differentiation associated protein 2. (497 aa)    
Predicted Functional Partners:
MACROH2A2
macroH2A.2 histone.
  
 
 0.781
ENSODEP00000013816
annotation not available
    
   0.751
ENSODEP00000014761
annotation not available
    
   0.751
PARP2
poly(ADP-ribose) polymerase 2.
    
 
 0.734
WDR3
WD repeat domain 3.
      
 0.710
PARP1
poly(ADP-ribose) polymerase 1.
    
 
 0.685
Aifm1
annotation not available
  
 0.678
ENSODEP00000022699
annotation not available
   
    0.672
MACROH2A1
Core histone macro-H2A.1.
    
 0.657
XPC
XPC complex subunit, DNA damage recognition and repair factor.
    
   0.640
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.