Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CKAP2Cytoskeleton associated protein 2. (625 aa)    
Predicted Functional Partners:
ENSODEP00000011772
annotation not available
   
  
 0.956
KIF20A
Kinesin family member 20A.
   
  
 0.947
NDC80
NDC80 kinetochore complex component.
   
  
 0.946
CENPE
Centromere protein E.
   
 
 0.944
KIF11
Kinesin family member 11.
   
  
 0.943
ENSODEP00000019014
annotation not available
   
 
 0.942
ENSODEP00000026964
annotation not available
   
 
 0.942
ENSODEP00000006176
annotation not available
   
  
 0.939
KIF2C
Kinesin family member 2C.
   
 
 0.939
TOP2A
DNA topoisomerase II alpha.
   
  
 0.937
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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