STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001309annotation not available (167 aa)    
Predicted Functional Partners:
LOC101581379
annotation not available
   
 0.999
ENSODEP00000000255
annotation not available
   
 0.997
ENSODEP00000025619
annotation not available
   
 0.997
CYC1
Cytochrome c1.
   
 0.995
UQCRFS1
Ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1.
   
 0.995
COX6A2
Cytochrome c oxidase subunit 6A2, mitochondrial.
   
 0.994
LOC101569401
Cytochrome c oxidase subunit 6A1, mitochondrial-like.
   
 0.991
COX6A1
Cytochrome c oxidase subunit 6A1.
   
 0.991
ENSODEP00000010523
annotation not available
   
 0.991
ENSODEP00000010769
annotation not available
   
 0.991
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: medium (66%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.