ENSODEP00000001318 protein (Octodon degus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

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co-expression

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gene neighborhood

gene co-occurrence

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Gene Fusion

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[Homology]

Score

ENSODEP00000001318

annotation not available (152 aa)

Predicted Functional Partners:

RANBP2

0.983

RANGAP1

0.983

PIAS4

0.974

ENSODEP00000020743

0.974

ENSODEP00000007883

0.965

ENSODEP00000008802

0.965

PML

0.954

ENSODEP00000003945

0.952

PIAS1

0.952

TRIM28

0.951

Your Current Organism:

Octodon degus

NCBI taxonomy Id: 10160
Other names: O. degus, degu

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... protein sequences:

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSODEP00000001318	ENSODEP00000003945	ENSODEP00000001318	ENSODEP00000003945	annotation not available	annotation not available	0.952
ENSODEP00000001318	ENSODEP00000007883	ENSODEP00000001318	ENSODEP00000007883	annotation not available	annotation not available	0.965
ENSODEP00000001318	ENSODEP00000008802	ENSODEP00000001318	ENSODEP00000008802	annotation not available	annotation not available	0.965
ENSODEP00000001318	ENSODEP00000020743	ENSODEP00000001318	ENSODEP00000020743	annotation not available	annotation not available	0.974
ENSODEP00000001318	PIAS1	ENSODEP00000001318	ENSODEP00000022366	annotation not available	Protein inhibitor of activated STAT 1.	0.952
ENSODEP00000001318	PIAS4	ENSODEP00000001318	ENSODEP00000020420	annotation not available	Protein inhibitor of activated STAT 4.	0.974
ENSODEP00000001318	PML	ENSODEP00000001318	ENSODEP00000020603	annotation not available	Promyelocytic leukemia.	0.954
ENSODEP00000001318	RANBP2	ENSODEP00000001318	ENSODEP00000017916	annotation not available	E3 SUMO-protein ligase RanBP2.	0.983
ENSODEP00000001318	RANGAP1	ENSODEP00000001318	ENSODEP00000019750	annotation not available	Ran GTPase activating protein 1.	0.983
ENSODEP00000001318	TRIM28	ENSODEP00000001318	ENSODEP00000001289	annotation not available	Tripartite motif containing 28.	0.951
ENSODEP00000003945	ENSODEP00000001318	ENSODEP00000003945	ENSODEP00000001318	annotation not available	annotation not available	0.952
ENSODEP00000003945	ENSODEP00000007883	ENSODEP00000003945	ENSODEP00000007883	annotation not available	annotation not available	0.546
ENSODEP00000003945	ENSODEP00000008802	ENSODEP00000003945	ENSODEP00000008802	annotation not available	annotation not available	0.546
ENSODEP00000003945	ENSODEP00000020743	ENSODEP00000003945	ENSODEP00000020743	annotation not available	annotation not available	0.576
ENSODEP00000003945	PIAS4	ENSODEP00000003945	ENSODEP00000020420	annotation not available	Protein inhibitor of activated STAT 4.	0.968
ENSODEP00000003945	PML	ENSODEP00000003945	ENSODEP00000020603	annotation not available	Promyelocytic leukemia.	0.629
ENSODEP00000003945	RANBP2	ENSODEP00000003945	ENSODEP00000017916	annotation not available	E3 SUMO-protein ligase RanBP2.	0.639
ENSODEP00000007883	ENSODEP00000001318	ENSODEP00000007883	ENSODEP00000001318	annotation not available	annotation not available	0.965
ENSODEP00000007883	ENSODEP00000003945	ENSODEP00000007883	ENSODEP00000003945	annotation not available	annotation not available	0.546
ENSODEP00000007883	ENSODEP00000020743	ENSODEP00000007883	ENSODEP00000020743	annotation not available	annotation not available	0.996