STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHYHIPLphytanoyl-CoA 2-hydroxylase interacting protein like. (330 aa)    
Predicted Functional Partners:
PDE9A
Phosphodiesterase 9A.
    
 
 0.938
TMCO6
Transmembrane and coiled-coil domains 6.
    
 
 0.736
LIMD1
LIM domains containing 1.
    
   0.678
WTIP
WT1 interacting protein.
    
   0.678
PHACTR3
Phosphatase and actin regulator 3.
   
  
 0.676
KIF15
Kinesin family member 15.
    
   0.672
ENSODEP00000014526
annotation not available
    
 
 0.665
PAQR5
Progestin and adipoQ receptor family member 5.
    
 
 0.665
PHYHIP
phytanoyl-CoA 2-hydroxylase interacting protein.
   
    0.629
MSI1
Musashi RNA binding protein 1.
    
   0.583
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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