STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC181Coiled-coil domain containing 181. (508 aa)    
Predicted Functional Partners:
PPP1R32
Protein phosphatase 1 regulatory subunit 32.
      
 0.757
RASSF3
Ras association domain family member 3.
      
 0.698
ENSODEP00000012805
annotation not available
      
 0.610
CCDC113
Coiled-coil domain containing 113.
      
 0.608
CFAP100
Cilia and flagella associated protein 100.
      
 0.607
WDR35
WD repeat domain 35.
      
 0.604
CFAP58
Cilia and flagella associated protein 58.
      
 0.595
DRC7
Dynein regulatory complex subunit 7.
      
 0.595
WDR78
WD repeat domain 78.
      
 0.587
ANKRD9
Ankyrin repeat domain 9.
      
 0.585
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.