Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001327annotation not available (54 aa)    
Predicted Functional Partners:
ENSODEP00000013222
annotation not available
   
 0.994
ATG7
Autophagy related 7.
   
 0.991
SQSTM1
Sequestosome 1.
   
 0.988
ATG4A
Autophagy related 4A cysteine peptidase.
   
 0.987
ENSODEP00000024666
annotation not available
   
 0.985
ENSODEP00000012352
annotation not available
   
 0.983
ENSODEP00000014978
annotation not available
   
 0.983
ATG12
Autophagy related 12.
   
 0.980
ATG5
Autophagy related 5.
    
 0.977
ATG4C
Autophagy related 4C cysteine peptidase.
   
 0.974
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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