STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFTRCF transmembrane conductance regulator. (1479 aa)    
Predicted Functional Partners:
SLC9A3R1
SLC9A3 regulator 1.
    
 0.999
SLC9A3R2
SLC9A3 regulator 2.
    
 0.996
DERL1
Derlin 1.
    
 0.993
PRKAA1
Protein kinase AMP-activated catalytic subunit alpha 1.
    
 0.992
USP10
Ubiquitin specific peptidase 10.
    
 0.992
GOPC
Golgi associated PDZ and coiled-coil motif containing.
    
 0.991
VCP
Valosin containing protein.
   
 0.990
PRKAA2
Protein kinase AMP-activated catalytic subunit alpha 2.
    
 0.987
TJP1
Tight junction protein 1.
     
 0.973
ENSODEP00000000209
annotation not available
    
 0.969
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.