STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOVA1NOVA alternative splicing regulator 1. (463 aa)    
Predicted Functional Partners:
MSI1
Musashi RNA binding protein 1.
    
 
 0.764
MSI2
Musashi RNA binding protein 2.
    
 
 0.764
DAZAP1
DAZ associated protein 1.
    
 
 0.700
TP53BP1
Tumor protein p53 binding protein 1.
    
   0.644
DCC
DCC netrin 1 receptor.
      
 0.595
Bola2b
bolA family member 2B.
      
 0.583
PTBP2
Polypyrimidine tract binding protein 2.
    
 
 0.576
RASA1
RAS p21 protein activator 1.
    
 
 0.562
LETMD1
LETM1 domain containing 1.
      
 0.548
SRRM4
Serine/arginine repetitive matrix 4.
      
 0.545
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.