Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001343annotation not available (264 aa)    
Predicted Functional Partners:
TMEM64
Transmembrane protein 64.
      
 0.880
TMEM109
Transmembrane protein 109.
      
 0.849
PDHB
Pyruvate dehydrogenase E1 beta subunit.
     
 0.754
ENSODEP00000000603
annotation not available
    
 0.683
ENSODEP00000012115
annotation not available
    
 0.683
NADK
NAD kinase.
  
 
  0.680
OXA1L
OXA1L mitochondrial inner membrane protein.
     
 0.661
ENSODEP00000001245
annotation not available
      
 0.653
ENSODEP00000017643
annotation not available
  
 
  0.652
GLDC
Glycine decarboxylase.
  
 
  0.651
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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