STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL55Mitochondrial ribosomal protein L55. (119 aa)    
Predicted Functional Partners:
MRPL40
Mitochondrial ribosomal protein L40.
   
 
 0.994
MRPL58
Mitochondrial ribosomal protein L58.
   
 
 0.991
MRPL21
Mitochondrial ribosomal protein L21.
   
 
 0.991
MRPL52
Mitochondrial ribosomal protein L52.
   
 
 0.990
ENSODEP00000025023
annotation not available
   
   0.990
MRPL16
Mitochondrial ribosomal protein L16.
   
 0.989
MRPS25
Mitochondrial ribosomal protein S25.
   
 
 0.987
AURKAIP1
Aurora kinase A interacting protein 1.
   
   0.987
ENSODEP00000018957
annotation not available
   
   0.987
MRPL46
Mitochondrial ribosomal protein L46.
   
 
 0.987
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.